Browse ArabiTag Libraries
| ESTs in Library | Library Name (dbEST) |
Description | |
| 670 | Strasbourg-A
|
tissue=sliced leaves of A.thaliana ecotype columbia; clone_library=Strasbourg-A; Cloning vector: Lambda ZAPII; Physiological condition: leaves strips incubated 2/3/4 days in liquid culture medium. more |
AS Events Supported |
| 985 | Grenoble-B
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tissue=Flower buds of A.thaliana ecotype columbia C24; clone_library=Grenoble-B; Cloning vector: Lambda ZAP. more |
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| 286 | Gif-SeedA+B
|
tissue=Green siliques of A.thaliana ecotype columbia; clone_library=Gif-SeedA+B; Cloning vector: Lambda ZAPII non-oriented. more |
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| 7 | Versailles-VD
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In vitro-grown etiolated seedlings, 5 days old. more |
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| 325 | Ors-A
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| 1515 | Versailles-VB
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| 124 | Versailles-VC
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| 898 | AC16H
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| 2 | Grenoble-A
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tissue=Flower buds of A.thaliana ecotype columbia C24. more |
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| 99 | AT-NHC
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The AT-NHC library was made in Nam-Hai Chua's lab Rockefeller Univ. from whole plants. This cDNA library was made in Statagene's Lambda Zap using SmaI linkers and EcoRI-SmaI adaptors and cloned into the EcoRI site. more |
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| 677 | Lambda-PRL1
|
Lambda PRL1 is a cDNA library derived from equal quantities of 4 pools of mRNA. The mRNA sources were 1) 7 day germinated etiolated seedlings; 2) tissue culture grown roots; 3) staged plants half with 24 hour light cycle, half on 16 hr light, 8 hour more |
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| 28024 | Lambda-PRL2
|
Lambda PRL2 is a cDNA library derived from equal quantities of 4 pools of mRNA. The mRNA sources were 1) 7 day germinated etiolated seedlings; 2) tissue culture grown roots; 3) staged plants half with 24 hour light cycle, half on 16 hr light, 8 hour more |
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| 121 | Ra147.1
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Physiological conditions: cycling cells one hour post-inoculation with X.campestris pv campestris strain 147 in the presence of cycloheximide 1 micromolar. more |
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| 392 | Gif-SeedA
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Physiological condition: greenhouse plants. tissue_type: Green siliques more |
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| 37 | Strasbourg-FA
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Physiological condition: leaves strips incubated 2/3/4 days in liquid culture medium. tissue_type: sliced leaves more |
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| 116 | Gif-SiliqueB
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Physiological condition: greenhouse plants. tissue_type: Flowering tips more |
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| 346 | Perp-dry-seedA
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tissue_type: Dry seeds more |
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| 123 | AC13D
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| 241 | Ors-B
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Physiological condition: nitrate treated liquid-cultured A.thaliana. tissue_type: roots more |
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| 3 | Arabidopsis thaliana M.W.Schena
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| 333 | CD4-14
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Using 5 ug of polyadenylated mRNA from 3 day-old Arabidopsis thaliana (Columbia) seedling hypocotyls as template and oligo d(t) as primer, first strand synthesis was catalyzed by Moloney murine leukemia virus reverse transcriptase (Pharmacia). Second more |
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| 419 | CD4-15
|
Using 5 ug of polyadenylated mRNA from 3 day-old Arabidopsis thaliana (Columbia) seedling hypocotyls as template and oligo d(t) as primer, first strand synthesis was catalyzed by Moloney murine leukemia virus reverse transcriptase (Pharmacia). Second more |
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| 567 | CD4-16
|
Using 5 ug of polyadenylated mRNA from 3 day-old Arabidopsis thaliana (Columbia) seedling hypocotyls as template and oligo d(t) as primer, first strand synthesis was catalyzed by Moloney murine leukemia virus reverse transcriptase (Pharmacia). Second more |
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| 726 | CD4-13
|
Using 5 ug of polyadenylated mRNA from 3 day-old Arabidopsis thaliana (Columbia) seedling hypocotyls as template and oligo d(t) as primer, first strand synthesis was catalyzed by Moloney murine leukemia virus reverse transcriptase (Pharmacia). Second more |
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| 6 | Arabidopsis thaliana mRNA (J.Fleck)
|
equal quantities of 4 mRNA pools: 7 day old germinated etiolated seeds; tissue culture grown roots; staged plants with 24h light cycle, half on 16h light; and aerial tissues (stems, flowers and siliques) of plants more |
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| 184 | NaCl-treated Arabidopsis subtraction library
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Subtracted cDNA library from salt(NaCl)-treated whole plants more |
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| 17710 | Arabidopsis thaliana roots Columbia
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| 12403 | Arabidopsis thaliana aboveground organs two to six-week old
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| 17 | RAFL12
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Subtraction Library. The sequence was obtained from samples subjected to cold-treated (1, 2, 5, 10, and 24 hr) more |
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| 64 | RAFL13
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Subtraction Library. The sequence was obtained from samples subjected to dehydration-treated (1, 2, 5, 10, and 24 hr) more |
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| 31884 | RAFL14
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| 14393 | RAFL15
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| 33996 | RAFL16
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dark-grown more |
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| 14451 | RAFL17
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Subtraction Library. The sequence was obtained from samples subjected to dehydration-treated (1, 2, 5, 10 and 24 hr) and rehydration-treated (1, 2, 5, 10, and 24 hr after dehydration treatment) more |
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| 1250 | RAFL18
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Subtraction Library. The sequence was obtained from samples subjected to cold-treated (1, 2, 5, 10, and 24 hr) more |
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| 55599 | RAFL19
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Subtraction Library more |
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| 40460 | RAFL21
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Subtraction Library. The sequence was obtained from samples subjected to various stress and plant hormones-treated more |
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| 557 | RAFL2
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| 524 | RAFL3
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subjected to dehydration-treated(2hr) more |
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| 2042 | RAFL4
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subjected to cold-treated(1,2,5,10,24 hr) more |
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| 4241 | RAFL5
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subjected to dehydration-treated(1,2,5,10,24 hr) more |
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| 8135 | RAFL6
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subjected to dehydration (1, 2, 5, 10, 24 hr) and cold (1, 2, 5, 10, 24 hr) treatments more |
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| 22229 | RAFL7
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subjected to cold-treated (1, 2, 5, 10, 24 hr) more |
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| 3375 | RAFL8
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subjected to dehydration-treated (1, 2, 5, 10, 24 hr) more |
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| 29245 | RAFL9
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subjected to dehydration (1, 2, 5, 10, 24 hr) and cold (1, 2, 5, 10, 24 hr) treatments more |
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| 2648 | RAFL11
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subjected to various treatments (dehydration, cold, high salt, ABA, heat and UV). Dark-grown plants more |
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| 3345 | Infected Arabidopsis Leaf
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Mixed cDNA library of Arabidopsis and E. cichoracearum infected leaf from three weeks old Arabidopsis plants. Plants were harvested 3 days after infection and mRNA oligo dT selected. more |
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| 4 | Arabidopsis thaliana library (De Veylder L)
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| 49 | Size-selected small cDNAs of Arabidopsis thaliana
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cDNA names that include 'HR' are from the roots of hydroponically grown plants, names that include 'DS' are from developing seeds. All other clones are from two week old seedlings. more |
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| 5 | Arabidopsis thaliana Differential Display
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Isolated from differential display of cDNAs from leaves of Arabidopsis thaliana wildtype after treatment with the fungal protein Nep1. more |
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| 56 | Methyl Jasmonate Treated Arabidopsis Forward-Subtracted
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Clontech's PCR Suppression Subtractive Hybridization was used. Tester = plants sprayed with 50mM methyl jasmonate, and tissue harvested 1,8, 24 and 48h after treatment; driver = plants sprayed with water and tissue harvested 1,8, 24 and 48h. Cloned i more |
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| 3 | Methyl Jasmonate Treated Arabidopsis Reverse-Subtracted
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Clontech's PCR Suppression Subtractive Hybridization was used. Tester = plants sprayed with water and tissue harvested 1,8, 24 and 48h; driver = plants sprayed with 50mM methyl jasmonate, and tissue harvested 1,8, 24 and 48h after treatment. Cloned i more |
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| 46 | Early Ovule Development Forward Subtracted Library
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Clontech's PCR Suppression Subtractive Hybridization was used. Tester = ovaries collected within 24 hrs of pollination from wild type plants; driver = a male-sterile mutant. Cloned into Advantage PCR cloning vector (Clontech). more |
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| 11 | Virulent Peronospora parasitica Infected Arabidopsis
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Clontech's PCR Suppression Subtractive Hybridization was used. Tester = plants sprayed with water and tissue harvested 1,3 and 5 days; driver = plants sprayed with spores of Peronospora parasitica strain Ahco, and tissue harvested 1,3 and 5 days afte more |
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| 2 | Avirulent Peronospora parasitica Infected Reverse Subtracted
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Clontech's PCR Suppression Subtractive Hybridization was used. Tester = plants sprayed with water and tissue harvested 12h, 1, 2 and 3 days.; driver = plants sprayed with spores of Peronospora parasitica strain Emwa, and tissue harvested 12h, 1, 2 an more |
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| 246 | Virulent Peronospora parasitica Infected Arabidopsis
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Clontech's PCR Suppression Subtractive Hybridization was used. Tester = plants sprayed with spores of Peronospora parasitica strain Ahco, and tissue harvested 1,3 and 5 days after infection ; driver = plants sprayed with water and tissue harvested 1, more |
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| 110 | Avirulent Peronospora parasitica Infected Forward Subtracted
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Clontech's PCR Suppression Subtractive Hybridization was used. Tester = plants sprayed with spores of Peronospora parasitica strain Emwa, and tissue harvested 12h, 1, 2 and 3 days after infection ; driver = plants sprayed with water and tissue harves more |
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| 145 | Arabidopsis Acute Ozone pooled time-points
|
Clontech's PCR Suppression Subtractive Hybridization was used. Tester = plants exposed to 0.4 ul/L of ozone for 6 hours and tissue harvested 3, 6, 9,12 and 24h after treatment ; driver = plants exposed to clean air and tissue harvested 3, 6, 9 12 and more |
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| 130 | Arabidopsis Chronic Ozone Forward-Subtracted Library
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PCR Suppression Subtractive Hybridization library (Clontech PCR-Select). 'Tester' = RNA pooled from leaf tissue of plants exposed to 3, 6, and 9 days of ozone at 0.15 ul/L for 6 h/d. 'Driver' = leaf tissue from control plants maintained in clean air. more |
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| 110 | Arabidopsis Salicylic Acid Subtracted Library
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A cDNA library enriched for genes differentially expressed during activation of systemic acquired resistance (in response to salicylic acid treatment) was constructed using CLONTECH PCR-Select cDNA Subtraction Kit (CLONTECH Laboratories, Inc.). 'Test more |
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| 235 | Arabidopsis avirulent Pseudomonas syringae subtracted
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A cDNA library enriched for Arabidopsis genes differentially expressed during activation of hypersensitive resistance (in response to infection by P. syringae pv. tomato DC3000 expressing avrRpm1) was constructed using CLONTECH PCR-Select cDNA Subtra more |
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| 146 | Arabidopsis virulent Pseudomonas syringae subtracted library
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A cDNA library enriched for Arabidopsis genes differentially expressed during disease (in response to infection by P. syringae pv. tomato DC3000) was constructed using CLONTECH PCR-Select cDNA Subtraction Kit (CLONTECH Laboratories, Inc.). 'Tester'= more |
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| 3551 | MPIZ-ADIS-019
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RNA from cellculture (At7) 5 days after inoculation treated with 0.002 mM cycloheximid for 2 h in the dark. Sequence submission managed by RZPD/GABI-Primary database: http://gabi.rzpd.de. This clone is available from RZPD; contact RZPD (clone@rzpd.de more |
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| 1875 | MPIZ-ADIS-027
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cDNA library from Arabidopsis thaliana, accession Eifel-2; ten week old total plants grown under long-day conditions in soil, whole adult plants were treated for 24 hours with different stresses, (1) at 4M-0 C in the dark, (2), at 37 Grad C in the da more |
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| 1627 | MPIZ-ADIS-014
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cDNA library from Arabidopsis thaliana, accession Cvi; six weeks old total plants grown under long-day conditions in soil, whole adult plants were treated for 24 hours with different stresses, (1) at 4 Grad C in the dark, (2), at 37 Grad C in the dar more |
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| 1664 | MPIZ-ADIS-013
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RNA from total, adult, 6 weeks old Arabidopsis thaliana (accession Nd-1) plants, grown in the greenhouse under long day conditions in soil treated for 24 hours with different stresses, (1) at 4 Grad C in the dark, (2), at 37 Grad C in the dark, (3) l more |
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| 1099 | MPIZ-ADIS-012
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cDNA library from Arabidopsis thaliana, accession Landsberg erecta; six weeks old total plants grown under long-day conditions in soil, whole adult plants were treated for 24 hours with different stresses, (1) at 4M-0 C in the dark, (2), at 37 Grad C more |
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| 2499 | MPIZ-ADIS-008
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cDNA library from Arabidopsis thaliana, accession C24; seedling; Lambda ZAPII phage library was made at the Max-Planck-Institute of Molecular Plant Physiology, Golm, Germany and mass-excised at the Max-Planck-Institute for Plant Breeding Research, Co more |
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| 1198 | MPIZ-ADIS-035
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cDNA library from Arabidopsis thaliana, accession Achkarren-2; inflorescences from flower buds to young siliques; library was made at the Max-Planck-Institute for Plant Breeding Research, Cologne, Germany; cloning sites SalI-NotI, primer sites and or more |
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| 79 | Cloned RT-PCR products of Arabidopsis thaliana
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Gene specific primers used to amplify gene fragments from 1st strand cDNA more |
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| 6164 | Arabidopsis Leaf Senescence Library
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Senescent rosette leaves #5 and #6 (counted from the bottom) were harvested and immediately frozen in liquid N2. The leaves were visibly yellow excepted for the leaf base areas that were still greenish. more |
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| 2 | Lambda-PRL2 (P.Kapranov)
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PRL2 cDNA library, MSU-DOE Plant Research Laboratory, Michigan State University; Newman,T. et al., Plant Physiology 106: 1241-1255 (1994) more |
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| 20 | pi mRNA differential display clones
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cDNA fragments from mRNA differential display of the pistillata (pi) floral homeotic mutant inserted in either orientation into pGEM-T vector (Promega). more |
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| 201 | CD4-6
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Flower cDNA library, D. Weigel and associates (reference 217). Library data: RNA source: Landsberg erecta inflorescence with predominately younger flower buds. Features: made using Stratagene UniZap kit directionally cloned; 5' at EcoRI 3' at XhoI si more |
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| 1 | Arabidopsis thaliana 2 week old shoots
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| 28 | Arabidopsis thaliana cell suspension
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cell suspension; isolated with polyclonal antibodies against total protein from either plasma membrane or tonoplast more |
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| 38 | YAC clone CIC7E11 region-specific cDNA
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| 75 | YAC clone CIC8B11 region-specific cDNA
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| 4 | Hairy root culture
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mRNA was prepared from prepared using polyA+ mRNA isolated from Arabidopsis hairy root cultures (ecotype C24) induced with Agrobacterium rhizogenes. The roots were treated with low-oxygen for 4 hours in liquid Murashige and Skoog (MS) medium, incubat more |
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| 1559 | MPIZ-ADIS-066
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cDNA library from Arabidopsis thaliana, accession Wassilewskija-0; roots from three weeks old plants grown on MS-plates at 26M-0C with 16 hours light/day; library was made at the Max-Planck-Institute for Plant Breeding Research, Cologne, Germany; clo more |
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| 1587 | Arabidopsis ag-1 35S:AG-GR forward subtraction library
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Subtractive library constructed using the CLONTECH PCR-select cDNA subtraction kit. Transgenic plants homozygous for the ag-1 mutation and carrying a 35S:AG-GR construct were generated. RNA was isolated from inflorescences with floral meristems and u more |
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| 12754 | Arabidopsis thaliana green siliques Columbia
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| 4504 | AtM1
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About 1 week after bolting, cDNA synthesis using SuperscriptTM-system (Invitrogen) with an oligo(dT)-primer containing NotI restriction site and a SalI adapter. The main library (plate numbers begin with 1) of 38,000 clones was rearrayed into the sub more |
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| 84 | Arabidopsis thaliana aerial vegetative tissues 4-weeks old
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ecotype: Columbia 0 ; country: France more |
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| 2417 | Arabidopsis thaliana Adult vegetative tissue Col-0
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| 2317 | Arabidopsis thaliana Hormone Treated Callus Col-0
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| 927 | Arabidopsis thaliana Silique Col-0
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| 1737 | Arabidopsis thaliana Flowers and buds Col-0
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| 342 | Arabidopsis RT-PCR Products (CSHL)
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DNA was extracted from Arabidopsis thaliana whole plant tissue, provided by members of Rob Martienssen's lab, using TRIZOL. Primers were designed in Hypothetical genes and un-annotated regions in Arabidopsis that are conserved in Brassica oleracea lo more |
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| 35 | RIKEN-PMB-FL1
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RIKEN-PMB-FL1 more |
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| 21 | FL5
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| 5 | FL3
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| 6 | FL2
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| 3366 | Arabidopsis thaliana above-ground organ two to six-week old
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| 1161 | Arabidopsis thaliana liquid-cultured seedlings Columbia
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| 27 | cDNA-AFLP germinating seeds
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cDNA fragments of genes expressed during seed germination from cDNA-AFLP experiment were cloned in pGEM-T vector more |
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| 301 | Arabidopsis Gateway cDNA Library
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To clone DNA sequences for functional analysis and expression in multiple systems more |
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| 34 | Arabidopsis CaMs library
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| 49 | Arabidopsis pSMASH Library
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The plasmid vector, pSMASH, is a yeast expression vector derived from pGAD424 (Clontech). It was designed for selective cloning of the genes encoding secreted and membrane proteins. Briefly, it contains a EcoRI-NotI subcloning sites followed by a Kex more |
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| 6 | Arabidopsis thaliana library (Josefsson LG)
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| 27 | Cloned cDNAs of Arabidopsis thaliana generated by mRNA
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Templates for the differential-display RT-PCR were reverse-transcribed from total cellular RNA extracted (1) from excised feeding sites of roots with parasitic nematodes attached to it and (2) from adjacent root pieces of the same size supplemented w more |
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| 1 | Arabidopsis thaliana library (Shinozaki K)
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| 73 | Arabidopsis thaliana library (Motohashi R)
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| 43241 | CERES-149
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| 632 | CERES-AN56
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| 72749 | CERES-148
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| 12465 | CERES-AL45
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| 15692 | CERES-AL46
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| 16401 | CERES-AN65
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| 32308 | CERES-147
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| 64 | CERES-AL25
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| 960 | CERES-130
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| 90 | CERES-AL36
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| 1274 | CERES-AN
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| 217 | CERES-AN10
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| 1080 | CERES-AS12
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| 174 | CERES-AN67
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| 1400 | CERES-AU1
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| 92 | CERES-AL15
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| 294 | CERES-AL6
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| 957 | CERES-131
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| 797 | CERES-129
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| 136 | CERES-AB1
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| 150 | CERES-AL5
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| 230 | CERES-AL16
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| 299 | CERES-AN55
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| 28 | CERES-AL35
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| 13 | CERES-AD65
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| 7 | CERES-AL3
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| 15 | Arabidopsis thaliana RT-PCR products
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Direct sequencing of Arabidopsis thaliana RT-PCR products more |
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| 80 | MPIZ-ADIS-065a
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In the context of the EU-funded project REGIA (QLG-CT11999-00876, coordinator Javier Paz-Ares), a set of transcription factor ORFs was generated. The ORFs were produced in a decentralized way in the labs of the participants. Most of the ORFs were gen more |
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| 106 | MPIZ-ADIS-065g
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In the context of the GABI-TFs project (PI: Bernd Weisshaar; GABI-TFs was a part of the German plant genomics program GABI, FKZ 0312276N), a set of transcription factor ORFs was generated. The ORFs were generated by RT-PCR using cDNA from various A. more |
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| 15 | MPIZ-ADIS-065b
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In the context of the EU-funded project REGIA (QLG-CT11999-00876, coordinator Javier Paz-Ares), a set of transcription factor ORFs was generated. The ORFs were produced in a decentralized way in the labs of the participants. Most of the ORFs were gen more |
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| 12 | MPIZ-ADIS-065c
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In the context of the EU-funded project REGIA (QLG-CT11999-00876, coordinator Javier Paz-Ares), a set of transcription factor ORFs was generated. The ORFs were produced in a decentralized way in the labs of the participants. Most of the ORFs were gen more |
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| 1828 | MPIZ-ADIS-065d
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In the context of the EU-funded project REGIA (QLG-CT11999-00876, coordinator Javier Paz-Ares), a set of transcription factor ORFs was generated. The ORFs were produced in a decentralized way in the labs of the participants. Most of the ORFs were gen more |
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| 2 | MPIZ-ADIS-065e
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In the context of the EU-funded project REGIA (QLG-CT11999-00876, coordinator Javier Paz-Ares), a set of transcription factor ORFs was generated. The ORFs were produced in a decentralized way in the labs of the participants. Most of the ORFs were gen more |
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| 168 | MPIZ-ADIS-065f
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In the context of the EU-funded project REGIA (QLG-CT11999-00876, coordinator Javier Paz-Ares), a set of transcription factor ORFs was generated. The ORFs were produced in a decentralized way in the labs of the participants. Most of the ORFs were gen more |
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| 96 | Aerial tissue from 28-day plants Columbia
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cDNA was reverse transcribed and amplified by PCR. The primer sequences are the first 20 bp at each end. more |
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| 143 | Aerial tissue from 28-day plants Landsberg erecta
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cDNA was reverse transcribed and amplified by PCR. The primer sequences are the first 20 bp at each end. more |
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| 1 | Arabidopsis thaliana 3' RACE
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BD Biosciences 3' RACE kit primed with gene specific primer and 3'CDS primer A and UPM primers more |
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| 1 | Arabidopsis thaliana 5' RACE
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BD Biosciences 5' RACE kit primed with gene specific primer and 5'CDS, SMARTII A oligo and UPM primers more |
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| 1 | Arabidopsis thaliana library (Tan K)
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| 4 | Arabidopsis thaliana immature siliques
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This sequence is obtained from a PCR product generated by differential display method. cDNA prepared from immature siliques (10 days after flowering) was used as the template more |
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| 16 | Arabidopsis thaliana germinating seeds
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| 3022 | A. thaliana, Ohio State clone set
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cDNA library was made from selected clones from the Arabidopsis thaliana Ohio State clone set. more |
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| 367 | A. thaliana, Columbia Col-0, inflorescence-1
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cDNA library was derived from untreated inflorescence tissue from Arabidopsis thaliana, Columbia Col-0, at 4 - 7 weeks. Plants were grown in 1:1:1 peat moss/vermiculite/perlite soil at 22 deg. C +/- 3 deg. C under constant light, and watered with fer more |
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| 692 | A. thaliana, Columbia Col-0, inflorescence-2
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cDNA library was derived from untreated inflorescence tissue from Arabidopsis thaliana, Columbia Col-0, at 4 - 7 weeks. Plants were grown in 1:1:1 peat moss/vermiculite/perlite soil at 22 deg. C +/- 3 deg. C under constant light, and watered with fer more |
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| 562 | A. thaliana, Columbia Col-0, root-1
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cDNA library was derived from untreated root tissue from Arabidopsis thaliana, Columbia Col-0, at 4 - 7 weeks. Plants were grown in 1:1:1 peat moss/vermiculite/perlite soil at 22 deg. C +/- 3 deg. C under constant light, and watered with fertilizer. more |
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| 676 | A. thaliana, Columbia Col-0, root-2
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cDNA library was derived from untreated root tissue from Arabidopsis thaliana, Columbia Col-0, at 4 - 7 weeks. Plants were grown in 1:1:1 peat moss/vermiculite/perlite soil at 22 deg. C +/- 3 deg. C under constant light, and watered with fertilizer. more |
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| 640 | A. thaliana, Columbia Col-0, rosette-1
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cDNA library was derived from untreated rosette tissue from Arabidopsis thaliana, Columbia Col-0, at 4 - 7 weeks. Plants were grown in 1:1:1 peat moss/vermiculite/perlite soil at 22 deg. C +/- 3 deg. C under constant light, and watered with fertilize more |
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| 897 | A. thaliana, Columbia Col-0, rosette-2
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cDNA library was derived from untreated rosette tissue from Arabidopsis thaliana, Columbia Col-0, at 4 - 7 weeks. Plants were grown in 1:1:1 peat moss/vermiculite/perlite soil at 22 deg. C +/- 3 deg. C under constant light, and watered with fertilize more |
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| 814 | A. thaliana, Columbia Col-0, rosette-3
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cDNA library was derived from untreated rosette tissue from Arabidopsis thaliana, Columbia Col-0, at 4 - 7 weeks. Plants were grown in 1:1:1 peat moss/vermiculite/perlite soil at 22 deg. C +/- 3 deg. C under constant light, and watered with fertilize more |
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| 272 | A. thaliana, mixed source
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This sequence was obtained from a clone generated with a PCR product of the target gene. more |
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| 44 | Lambda ZipLox designated PRL2
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| 5 | Arabidopsis thaliana Columbia
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| 17 | Arabidopsis thaliana Above-ground organ from two to six-week
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| 178 | Arabidopsis thaliana Col0 seed
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| 1 | Arabidopsis thaliana Col met1-1 5' RACE
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BD Biosciences 5' RACE kit primed with gene specific primer and 5'CDS, SMARTII A oligo and UPM primers more |
AS Events Supported |
| 5 | Arabidopsis thaliana Col ddm1-1 5' RACE
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BD Biosciences 5' RACE kit primed with gene specific primer and 5'CDS, SMARTII A oligo and UPM primers more |
AS Events Supported |
| 111302 | pooled cDNA populations
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Arabidopsis roots, inflorescence, callus, young seedlings and Arabidopsis treated with cold, heat, salt, 2,4-D, hydrogen peroxide, UV, IAA, Xanthomonas and Pseudomonas. more |
AS Events Supported |
| 2 | Arabidopsis thaliana TDNA insertion lines PCR
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A Sequence-Indexed Library of Insertion Mutations in the Arabidopsis Genome. mRNA (EST) was obtained from transgenic line with artificial constitutive expression of 1st exon of At1g12860 gene. more |
AS Events Supported |
| 1 | Arabidopsis thaliana X-line TDNA insertion lines PCR
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A Sequence-Indexed Library of Insertion Mutations in the Arabidopsis Genome more |
AS Events Supported |
| 1 | Arabidopsis thaliana O-line TDNA insertion lines PCR
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A Sequence-Indexed Library of Insertion Mutations in the Arabidopsis Genome more |
AS Events Supported |
| 541852 | 8-day Arabidopsis seedlings, aerial tissues
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Arabidopsis seedlings grown on soil 8-days in continuous light at 20 C. RNA was extracted from aerial tissues and cDNA prepared from mRNA after oligodT priming. more |
AS Events Supported |
| 1 | Arabidopsis thaliana E9-line mRNA
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AS Events Supported | |
| 249438 | Arabidopsis ovule high throughput cDNA library
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Ovules were microdissected from stage14 flowers. 0.5 ug of RNA was reverse transcribed and PCR amplified for 15 cycles using the BD SMART protocol (Clontech). cDNAs were fragmented and sequenced by the 454 corporation. more |
AS Events Supported |
| 97 | Arabidopsis thaliana col-0 suppression subtraction cDNA
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AS Events Supported | |
| 462 | Arabidopsis thaliana Col-0 RACE (RWM_NL_2007)
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RACE-PCR was performed with the Marathon(TM) cDNA Amplification Kit (Clontech, Palo Alto, CA, USA) according to the manufacturer's instructions. Total RNA was extracted from the leaves of about four-week old wild-type Arabidopsis Col-0 plants using t more |
AS Events Supported |
| 2 | Direct sequencing of RT-PCR products of Arabidopsis thaliana
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Gene specific primers used to amplify gene fragments from 1st strand cDNA more |
AS Events Supported |
| 1007 | AA
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20 h 200mM NaCl more |
AS Events Supported |
| 642 | AB
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200mM NaCl more |
AS Events Supported |
| 333 | AC
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20 h 150mM NaCl more |
AS Events Supported |
| 5827 | Arabidopsis thaliana flower buds Columbia
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AS Events Supported | |
| 3 | Arabidopsis thaliana Col-0 RACE seven-day old seedling
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RACE-PCR was performed with the Marathon(TM) cDNA Amplification Kit (Clontech, Palo Alto, CA, USA) according to the manufacturer's instructions. Total RNA was extracted from the seven-day old seedling of Arabidopsis Col-0 plants using the TRIzol proc more |
AS Events Supported |
| 11237 | Arabidopsis developing seed
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AS Events Supported | |
| 9 | Arabidopsis thaliana early developing seeds Library
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mRNA derived from early developing seeds (heart stage embryo). cDNA library constructed using the SMART cDNA library technology according to the instructions of the manufacturer (CLONTECH). more |
AS Events Supported |
| 171 | Arabidopsis Acute Ozone Forward-Subtracted Library
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PCR Suppression Subtractive Hybridization library (Clontech PCR-Select). 'Tester' = leaf tissue from plants exposed to 1 hr 0.4 ul/L ozone. 'Driver' = leaf tissue from control plants maintained in clean air. Cloned into pCR2.1TOPO vector (Invitrogen) more |
AS Events Supported |
| 27 | Arabidopsis Acute Ozone Reverse-Subtracted Library
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PCR Suppression Subtractive Hybridization library (Clontech PCR-Select). 'Tester' = leaf tissue from plants exposed to 1 hr 0.4 ul/L ozone. 'Driver' = leaf tissue from control plants maintained in clean air. Cloned into pT-Adv vector (Clontech). more |
AS Events Supported |
| 623 | A
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AS Events Supported | |
| 551 | B
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AS Events Supported | |
| 151 | AD A. thaliana (Col-0 gl1) library enriched for salt-induced
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AD Arabidopsis thaliana library enriched for salt-induced transcripts from wildtype (Col-0 gl1) 10-14 day-old seedlings treated with 160 mM NaCl for 4 hours. more |
AS Events Supported |
| 571 | AD A. thaliana (Col-0 gl1) subtracted library enriched for
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AD Arabidopsis thaliana subtracted library enriched for salt-induced transcripts from wildtype (Col-0 gl1) 10-14 day-old seedlings treated with 160 mM NaCl for hours. more |
AS Events Supported |
| 1 | FL6
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AS Events Supported |